daisykuma22

issue with qiime dada2 denoise-ccs

1

Hi @benjjneb I have 24 clean CCS read datasets and i want to get amplicon sequence variants by running dada2. I got one issue when running dada2 denoise-ccs with QIIME2....

How to get the functional information of queried proteins?

10

## Expected Behavior Hi, Thanks for developing this great tool for structural alignment. I got the results by searching my PDB files against PDB100 database with the following code `foldseek...

confused about the model used

1

NOTE: if this is not a bug report, please use the [GitHub Discussions](https://github.com/facebookresearch/esm/discussions) for support questions (How do I do X?), feature requests, ideas, showcasing new applications, etc. hello, i...

The output results are incomplete

3

Hello! Thank you for the excellent work on pLM-BLAST! I'm currently testing pLM-BLAST using the same protein FASTA file as both the query and the database. This file contains approximately...