Daniel Straub
Daniel Straub
### Description of feature ## Idea 454 sequencing is probably not as much used for amplicon sequencing as Illumina MiSeq nowadays, but it was popular some time ago and is...
Hi there, first of all, trycycler seems a great tool, thanks for this! Disclaimer: I am using it the first time. What I really found extremely annoying is that `trycycler...
This is a collection of ideas that should be considered after the DSL2 conversion #56 is finished. The list is subject to change. Any ideas or discussions are welcome. ####...
Several processes are using tools that are maybe interesting also in other pipeline and could be made available in [nf-core/modules](https://github.com/nf-core/modules/tree/master/modules), such as: - modules/local/canu.nf - modules/local/dfast.nf - modules/local/medaka.nf - modules/local/miniasm.nf...
### Description of the bug The error massage says: ``` The following samples had too few reads (
### Description of the bug `sidle/reconstructed/reconstructed_merged.tsv` was wrongly formatted (note that the first line contains the abundance in the last 3 columns, while it is missing for the second and...
**Is your feature request related to a problem? Please describe.** First of all I think the nf-core website is great and holds a lot of informative and important content. Thanks...
### Description of the bug Hi there, thanks for the great pipeline! I am working with non-model organisms and attempted to use a bacterial reference genome. However, the docu was...
### Description of feature GPU acceleration seepds up binning with COMEBin and also SemiBin2. For SemiBin2 that mostly beneficial when no environment (model) is used and that is the case...
### Description of feature #### COMEBin Binner COMEBin was added in https://github.com/nf-core/mag/pull/875 but is currently not activated in any test profile. This is because it appears to require larger datasets...