Dave Bunten
Dave Bunten
@gwaybio - sure thing, here are a few guides which might inspire towards this: - [Opensource.guide - Best Practices - Share the workload](https://opensource.guide/best-practices/#share-the-workload) - [Opensource.guide - Building Community - Share...
Hello, this is a courtesy notice that Pcytominer's `master` branch has been renamed to `main` as part of changes merged in #303. While changes here should be seamless, GitHub is...
Hello, this is a courtesy notice that Pcytominer's `master` branch has been renamed to `main` as part of changes merged in #303. While changes here should be seamless, GitHub is...
Thanks @bethac07 for the background here and @gwaybio for reaching out! In looking at this my understanding is that we'd need to do the following: unify functionality between methods `SingleCells._compartment_df_generator()`...
@gwaybio cheers, I appreciate simple approaches too! As it stands, I don't know whether this is over-simple, and would vote that we give a try and find out what happens....
I think Modin could be very potent depending on how it's used within Pycytominer. One thing I recommend keeping in mind is the variance of support for especially the pd.DataFrame...
@jenna-tomkinson - thanks, this is not yet resolved. In order for this to be resolved, I think the following steps would be needed (at a minimum): - [ ] Capture...
Hi @gwaybio - I just wanted to double check on this: does this still need attention from a Pycytominer standpoint? I noticed https://github.com/broadinstitute/cell-health/issues/17 was closed an had a comment as...
Just wanted to chime in here to offer up some ideas. There's an opportunity to do some great things in this project with scalable dataframes from an in-memory perspective, and...
Thank you @gwaybio ! >Yes, I think this makes sense to do as well. We can create this repo, and start with a multi-table SQLite -> parquet implementation. IIRC, this...