Davis Bennett
Davis Bennett
One some monitors, the gray circles on the book cover are nearly impossible to see (left monitor). But on my right monitor I see the gray circles just fine. Perhaps...
In main, `Array` and `Group` have `__setstate__` methods that directly call `__init__`, which isn't great (mypy complains about this). We can avoid calling `__init__` by defining [`__reduce__`](https://docs.python.org/3/library/pickle.html#object.__reduce__) for these classes...
Currently when using a `Group` to get an existing `Array` via `Group.require_dataset`, there's no way to control the "write_empty_chunksness" of the array (since `Array.write_empty_chunks` is not part of the array...
This PR adds `getitems` and `setitems` methods to `BaseStore`, and removes some redundant `hasattr(store, 'getitems')` calls. This makes `FSStore` a bit less special and hopefully would make async array methods...
This PR addresses #757. `is_total_slice` takes a slice-like argument and a shape and returns True if the slice-like argument "fills" the shape, False otherwise. When performing writes, the output of...
The `is_total_slice` function is used to determine whether a selection corresponds to an entire chunk (`is_total_slice` -> `True`) or not (`is_total_slice` -> `False`). I noticed that `is_total_slice` is always `False`...
In the current spec, the zarr group for an image contains _arrays_ (the different scale levels of the image data) as well as (optionally) a _group_ (the `labels` group). E.g.,...
(Following on discussion from https://github.com/ome/ngff/pull/85) As schematized by @constantinpape [here](https://github.com/ome/ngff/pull/85#issuecomment-1044233185), the current (0.4) version of the spec results in a hierarchy like this: ``` image-group/ .zgroup
As a former PIMS user, I found that switching to dask for lazily representing big movies made my life a lot easier. Specifically, functions like this: https://github.com/MouseLand/FaceMap/blob/master/FaceMap/facemap.py#L69 are very concisely...
(Not sure if this should go here or dask-jobqueue) I'm trying to debug problems with an adaptive deployment on an LSF cluster. I have ~.5 TB of data saved on...