Craig Russell

icon company EMBL-EBI icon location Cambridge icon location Computer vision for life science

Results 32 comments of Craig Russell

Uncaught TypeError: Cannot read property '0' of undefined

Having this problem on Catalina on Atom Beta when trying to run any code lines Extend code executable Atom: 1.42.0-beta0 Electron: 4.2.7 Chrome: 69.0.3497.128 Node: v10.11.0 ``` TypeError: Cannot read...

Uncaught TypeError: Cannot read property '0' of undefined

Moved to vscode these days

Cluster workflow feature to allow shell commands or script to run before remote server setup (e.g. slurm) (wrap install script)

Similar problem, I tried to request an interactive shell on my cluster via my login node. Unfortunately this causes the vs code extension to timeout. I'm using LSF and I...

Cluster workflow feature to allow shell commands or script to run before remote server setup (e.g. slurm) (wrap install script)

The solution isn't super practical for me as the nodes get allocated with arbitrary names Ideally this proxy jumping would be automated

Add support for gitlab as build registry

This works for me: https://github.com/bioimagearchive/k8s-jupyterhub/blob/master/binderhub/ebi_dockerhub.yaml

Add support for gitlab as build registry

Update, it doesn't work for finding pre built images it just successfully pushes

Select pod resources from binder UI

This would be very useful

Add support for postBuildAdmin

I'd be very interested in this feature. For instance nvidia drivers and for linking folders outside of the home dir.

Add postPostBuildAdmin configuration file

Would love to see this

Using Nvidia CUDA with repo2docker

> You can build GPU enabled images with repo2docker by installing the `cudatoolkit` conda package. Check out the demo at https://github.com/jzf2101/GAN_tutorial/tree/gpu-binder which we used at NeurIPS. No changes to repo2docker...