Charles Tapley Hoyt
Charles Tapley Hoyt
The Bioregistry would like to automatically pull/scrape metadata from the AgroPortal API/website to support its semi-automatic alignment of prefixes. However, it's not clear from the AgroPortal website under what license...
The Bioregistry would like to automatically pull/scrape metadata from the EcoPortal API/website to support its semi-automatic alignment of prefixes. However, it's not clear from the EcoPortal website under what license...
The Bioregistry automatically pulls/scrape metadata from the BioPortal API/website to support its semi-automatic alignment of prefixes using [this code](https://github.com/biopragmatics/bioregistry/blob/main/src/bioregistry/external/bioportal.py). However, it's not clear from the BioPortal website under what license...
The Bioregistry pulls data from https://www.ncbi.nlm.nih.gov/genbank/collab/db_xref/. It's not clear what the licensing is (nor who the point of contact is, unfortunately) so I emailed [email protected] to see if they could...
The Bioregistry automatically scrape metadata from [the table on this page](https://www.ontobee.org) in OntoBee to support its semi-automatic alignment of prefixes using [this code](https://github.com/biopragmatics/bioregistry/blob/main/src/bioregistry/external/ontobee.py). However, it's not clear from the OntoBee...
The Bioregistry automatically pulls/scrape metadata about ontologies from the OLS API to support its semi-automatic alignment of prefixes using [this code](https://github.com/biopragmatics/bioregistry/blob/main/src/bioregistry/external/ols.py). However, it's not clear from the OLS website under...
The Bioregistry automatically would like to pull/scrape metadata from the AberOWL API/website to support its semi-automatic alignment of prefixes. However, it's not clear from the AberOWL website under what license...
Taking inspiration from @egonw's PR in https://github.com/biopragmatics/bioversions/pull/11#pullrequestreview-760647672, it would be great to add some [Bioschemas](https://bioschemas.org/) annotations to the Bioregistry site. ## Individual Datasets The Bioregistry provides metadata about its 1,300+...
@lmichan and @CondeArcana333 seem to be interested in annotating various database pages on Wikidata with corresponding Bioregistry prefixes. It might be good to use something like https://github.com/SuLab/WikidataIntegrator to automate content...
This is a placeholder issue to discuss prefix orthography and typography, which are fancy words describing how prefixes should look and feel. ### Minimum Prefix Requirements - New prefixes are...