Christian Schudoma

Results 2 issues of Christian Schudoma

Different results when annotating a large protein set at once vs splitting the input into multiple files

9 comment

Hi, I use eggnog-mapper to annotate large sets of metagenomic datasets, e.g. the GMGC (GMGC10.95nr.faa.gz >> 300 million sequences). In a recent experiment, I found that the the annotation results...

bug

Feature request: Output to stdout for Bifrost query/suppression of non-matching query sequences

Hi, I'm planning to run bifrost within automated pipelines on large metagenomic sample sets. In order to facilitate output filtering on the fly and reduce the size of the output...