Crystal Clitheroe comments

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                                            Crystal Clitheroe

error executing braker2(gmes_petap.pl)

Good Day, I think my problem may be related, braker is recently installed through miniconda env, and GenemarkES is in the ProtHint folder, both paths exported, and the GeneMark-EP tests...

Braker failed due to no genemark_hintsfile.gff.rnaseq.tmp file

Hi There. Im having same problem, weirdly in one instance of braker but not another. Running breaker in a miniconda env on our HPC worked with with the first job...

Segmentation fault in spades-hammer (error -11)

Hi there Is this error a memory problem? On Linux cluster, (max 600GB mem, 4 nodes, 8 cpuspernode) I also get error code -11 on SPAdes 3.13.0: == Error ==...

Segmentation fault in spades-hammer (error -11)

Dear @asl Thanks for getting back so fast! My apologies, I didn't mean to intrude on the issue, I though it would go here because of the same error code....

Bonito research model, dramatic increase in basecall quality scores

Hi, we are installing Guppy, Rerio and bonito basecallers on our gpu cluster, but are wondering how often latest bonito models get updated to Rerio, and where/how we can check...

Block table may be destroyed

Good day, I have a similar problem while spaln is running automatically in braker2; It seems that at the braker2 step: # OUTPUT OF makblk.pl STARTING # # Thu Jul...