crcardenas issues

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                                            crcardenas

fastp needs a directory to write output sequences

Minor thing that I've found through trial and error for fastp-v0.19.5 & fastp-v0.20.1 I cannot install the latest version of fastp; different issue: https://github.com/OpenGene/fastp/issues/383#issuecomment-1088442268 Regardless, here is the behavior I've...

Missing gene - blastn evalue rounded to 0.0

I am running mitofinder on assembled contigs to search for mtDNA/Genomes. However, I am missing CO1 from the output. I thought maybe I just didn't capture that mtGene. However, to...

Singularity run does not seem to limit threads

Hello, On a server without any job submission structure, I am running mitohifi with singularity. I have it limited to 4 threads: ``` singularity run -B /data/raw/Calosoma/NANOPORE/blobtools/CBX1139/mitohifi:/data/raw/Calosoma/NANOPORE/blobtools/CBX1139/mitohifi mitohifi_master.sif \ mitohifi.py...