Cooper

Results 3 issues of Cooper

Hi Shujun, I'd previously used EDTA when you included MITE-Tracker (or MITE Hunter? I'm not sure which) and got some decent results for a _de novo_ yeast species. Having seen...

Hello, Is there a way to specify the conversion from MAF to fasta be in chromosome order please, e.g. via the sequence used as reference? Or is this something that...

I've come across an issue when trying to convert .acf to .beta for use with BetaScan. I can generate acf files using the command: `glactools vcfm2acf --onlyGT --fai ref.fai pops.chr9.vcf...