Constantin

Hey, thank you for the comprehensive explanation. I agree with your points above and introducing `useNames` as an additional argument as the clearest solution, but also see why it would...

Hi Nikolas, sorry for the delay. I just got back from holidays. Thank you for highlighting this issue. Could you say a bit more with what kind of data are...

Hey, sorry for the delay. I was at a workshop this week. I did take a briefly this afternoon while waiting for my flight and tried the code below to...

Hey Alan, thanks for your kind words and please excuse the delay/ > Firstly, could you outline the reasons why you think your model is better for pseudobulk than alternatives...

Hi Cathy, that is a fair question. If you could provide a [reproducible](https://reprex.tidyverse.org/), I am happy to discuss specifics of the issues that you encountered. But I will try to...

Hi Cathy, thanks for reaching out again and for your feedback :) > However I am actually thinking about a case such as #22 because my plots are similar distribution,...

I think the problem is that you use the `experimentGroup` to form the pseudobulk, but also want to use it as the `design` argument. The manual way of forming the...

Hi sjwu571, someone reported a somewhat similar issue on the support side recently: https://support.bioconductor.org/p/9137290/ I assume that you have one of the fancy new M1 Macs, which have a different...

Hi Michael, thanks for the report. If I understand the report correctly, it looks like this processor behaves like windows (see [here](https://github.com/const-ae/glmGamPoi/blob/master/tests/testthat/test-residuals.R#L111)). Maybe the underlying issue is related to 32bit...

Hi KunFang, thank you for reaching out and for the detailed description of your problem. From a brief look over your code, it seems fine, but that is difficult to...