Chang Kim

Using STARSolo SJ.out.tab?

4

Hello, I was wondering if it was possible to accept splice junctions generated from STAR/STARSolo? I noticed it was slightly different from regtools in terms of junctions called. The data...

RDR preprocessing filtering out all genes

1

Hello, I'm running into an issue with run_RDR where it filters out all genes. It looks like the minimum gene of 3000 is not being enforced? Thanks, Chang

Hi, Since the data is cDNA would it be worthwhile to implement longcallR which is specifically dedicated to looking for SNPs in long read cDNA? Best, Chang