Colin Diesh

example of specific technical component of this issue: any change to renderProps requires re-fetching through getFeatures

There are a number of optimization related issues for this when RNA-seq is concerned. @carolinebridge-oicr sent some sample data that is deep iso-seq style RNA-seq and it really slows down...

one optimization was added for this which is called the ultralongfeaturescache. it could potentially help, it reduces re-calculating the mismatches datastructure. this is a tough issue though is is on...

just gotta give a +1 to this one, i think it would be really good and it often really clarifies the data to view it in read groups exciting screenshots...

note that we can sort of make a hackey approach to group by for example if we (a) copy track and (b) filter by tag in the copied track (once...

It is perhaps stalled? I dunno. I'm not actively working on it but would be cool to see it make progress somehow. We could introduce an extra category on the...

See https://github.com/GMOD/jbrowse-components/pull/1942 for working demo of this though

periodic motivation for this https://user-images.githubusercontent.com/82141791/215484889-6a032cc0-9c90-4a26-9689-7d5cb41a2ab5.png from https://github.com/katerinakazantseva/stRainy

my current thinking on this is to make e.g. spawn multiple alignments tracks. this is the easiest implementation wise, is the most general. it may have a bit less usability...

@carolinebridge-oicr @scottcain are you able to confirm this on mac at all? occasionally jbrowse desktop quitting crashes?