clee700

Hello, sorry to butt in, but I think you should have your cell type started with >. Maybe it thinks podocytes is a gene and is trying to convert that...

Did you find a solution? I have the same issue.

I still do not know what caused the issue or what it meant, but creating it as an Assay Object then turning that into a Seurat object seems to have...

I am having the same issue here. I wonder if this is the right function? https://scikit-learn.org/stable/modules/generated/sklearn.utils.graph.single_source_shortest_path_length.html?highlight=utils