Chris Gorgolewski comments

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                                            Chris Gorgolewski

Update BIDS website (http://bids.neuroimaging.io) with information from Starter Kit README

I think everything seems relevant with exception of "Contributing" section which has content specific to the bids starter kit repository.

Update BIDS website (http://bids.neuroimaging.io) with information from Starter Kit README

Great! Looking forward! BTW I think link to Neurostars is there: ![image](https://user-images.githubusercontent.com/238759/43783142-d51bfc46-9a15-11e8-9f62-9fdd021a35f5.png)

Newcomer flow

Just to clarify: is this what we think users are doing or what we would like users to do?

acquisition times in sub-{subject}_scans.tsv

+1 for a default that is closer to HIPAA and a command line switch that turns back storing the dates. On Sep 25, 2017 1:39 AM, "Russ Poldrack" wrote: From...

acquisition times in sub-{subject}_scans.tsv

Oh common - things don't have to be all or nothing. The same way adding some test to a project is a good idea even if you don't have 100%...

Noisy T1w leads to poor tissue segmentation

![image](https://user-images.githubusercontent.com/238759/36929070-fd356204-1e40-11e8-97f4-8473fc2e0c47.png) ds000108/reportlets/fmriprep/sub-24/anat/sub-24_T1w

Noisy T1w leads to poor tissue segmentation

![image](https://user-images.githubusercontent.com/238759/36929773-88e1208c-1e4a-11e8-8421-eba37c1005c3.png) ds000119/reportlets/fmriprep/sub-26/anat/sub-26_T1w_seg_brainmask.svg

Noisy T1w leads to poor tissue segmentation

![image](https://user-images.githubusercontent.com/238759/36929855-9e4384dc-1e4b-11e8-814e-a10e5b2cdf51.png) ds000121/reportlets/fmriprep/sub-01/anat/sub-01_T1w_seg_brainmask.svg

Noisy T1w leads to poor tissue segmentation

As I mentioned above I'm pretty sure applying DenoiseImage will solve this (I tested it a while ago - see https://github.com/poldracklab/mriqc/issues/497), but a) the ANTs implementation is slow (at least...