Chris McGinnis comments

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                                            Chris McGinnis

Troubleshooting results

Thanks for the quick response. deMULTIplex and demuxEM are two pipelines for demultiplexing sample-multiplexed scRNA-seq data. demuxEM was developed for demultiplexing nuclei hashing data (antibodies) and deMULTIplex was developed for...

Error in model.matrix.default(mt, mf, contrasts) when running summarizeSweep

Hi @himanshuballav16 and @Polly188 -- sorry for lack of response. Maybe you already figured this out, but what does head(gt.calls) and tail(gt.calls) look like? Do you have a column in...

Error in doubletFinder_v3 call (reuse.pANN != FALSE; argument is of length zero)

Hi @errcricket hmmm.... are you sure pann_data is being set correctly? Because it is internal to the function you may need to 'get' it from the global environment (https://www.rdocumentation.org/packages/base/versions/3.6.2/topics/get)

Tagged Github release?

Hi @MynorKyllJoy -- could you provide more details about what a "tagged Github release" is?