Chris Heydrick
Chris Heydrick
Coincidentally I looked at this myself this past week and just submitted PR #1495 that I believe fixes it. Open to thoughts.
@zm711 it's an int. si.set_global_job_kwargs(n_jobs=4)
@zm711 Looks like verbose is True by default. https://github.com/SpikeInterface/spikeinterface/blob/42e1f024aaa0c2af823f715a78d1d95a33807732/src/spikeinterface/exporters/to_phy.py#L37 I explicitly set it to True anyways, but the output was the same as in my screenshots above.
@alejoe91 and @zm711 thanks for commenting on this - it made me take a look again, and I figured out the problem. I decided to verify that commit 33d478a worked...
Thanks for giving me a heads up on the new functionality. Adding "additional_properties=["KSLabel"]" as an argument to export_to_phy() included in the export a file called "cluster_KSLabel.tsv". Phy apparently knows to...
The suggestion that @alejoe91 made worked. I had first tried setting `recording = None` thinking that would force the cleanup, but using `del recording` worked to release the files. I...
I updated #3295 to note that running Kilosort 4 prevents the .bin file from being deleted, despite first forcing deletion of the recording object. This PR remedies that, too, though...
I think I have a fix for this. I don't know why it works, but it allows the tests to successfully run on my Ubuntu PC. I'll submit a PR...
Yes, using wine and the Neo test suite. On one of my Ubuntu systems I never had issues opening a PL2 file (in the tests or otherwise), but on another...
Mysteriously, I can get the plexon2rawio tests to pass once, but subsequent runs (usually) fail. I'm going to see if Nikhil can replicate it. @nikhilchandra 