Alessandra

I just tried it, it doesn’t work for me: clang: error: the clang compiler does not support '-mtune=native' make: *** [RcppExports.o] Error 1 ERROR: compilation failed for package ‘leafcutter’ *...

Hi, I have the same issue - would appreciate any insight. Thanks

I have the same problem, did you ever figure it out? This is my command and log: ~/programs/anaconda2/bin/3DChromatin_ReplicateQC concordance --metadata_pairs metadata.pairs --outdir output_rHMC3_chr22 --methods HiC-Spector Step: concordance | Mon Feb...

I solved it by reducing the number of eigenvectors for HiC-Spector in the parameters file.