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                                            Michael Dickens

Parallel execution of MSA tools

how are the number of cores for the hhblits step determined? The example shows the three parallel steps are using 44 total cores on a 28 core machine; 8 cores...

non-docker AF2 on HPC cannot use GPU xla_bridge.py:257] No GPU/TPU found, falling back to CPU. (Set TF_CPP_MIN_LOG_LEVEL=0 and rerun for more info.)

Are you submitting this as a Slurm job script on the cluster? If so, are you requesting all GPUs on the compute node in the #SBATCH parameters? Although, AlphaFold currently...