Charlotte Wright issues

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                                            Charlotte Wright

Issue with using Racon in pipeline-pinfish-analysis

I am attempting to use Racon within the pipeline-pinfish-analysis Snakefile but the workflow fails at the point of polishing the transcripts. The sdtout file suggests that the issue is with...

error: File doesn't have the given chr_chr map.

Hello, When I run `straw('KR', hic_file, 'LR994552.1', 'LR994551.1','BP', res))` on a `.hic` file generated by yahs, the command runs fine. However, when I try it on a `.hic` file which...