Christoph Gohlke

Results 175 comments of Christoph Gohlke

Hi @bruno-pannunzio : it looks like some of these filters and transforms are supposed to be applied to the un-normalized intensity and Fourier components? Should we add a `normalize` parameter...

Anscombe transformation functions are added in #139

Hi @maurosilber, thanks for chiming in. Yes, we are interested in integrating your de-noising and binning methods into this library. As those need access to the un-normalized coefficients and number...

Hi @bruno-pannunzio : I am working on a PR to add a `normalize` parameter to the `phasor_from_signal` function. In addition, I think we might want to add the `mean` signal...

> Also should phasor_calibrate also receive the mean considering it uses phasor_center? Yes, `phasor_calibrate` needs `reference_mean`, but not `mean`. In your example, this would be `real, imag = phasor_calibrate(*phasor[1:], *reference_phasor,...

Hi @bruno-pannunzio : I propose to rename the existing `phasor_filter` function to `phasor_filter_median` and implement other filters as separate public functions instead of routing additional filters through a single, unified...

Hi @bruno-pannunzio : I think what Mauro meant was that you can indeed set the Fourier coefficients to zero if G and S are truly NaN and the mean intensity...

Closed by #147 and #167

The shared `bigtiff_1.tif` file contains 1994 separate "series". Tifffile returns the first series by default. Looks like the software used to produce the file did not use tifffile correctly to...

Change: ```Python from typing_extensions import Self ``` to ```Python if TYPE_CHECKING: from typing_extensions import Self ``` at https://github.com/pydata/xarray/blob/f1a2c08f21a8237c082913fcad2d77469448cf4c/xarray/core/accessor_dt.py#L8C1-L8C35