Christoph Gohlke
Christoph Gohlke
> @cgohlke I collected [this image](https://drive.google.com/file/d/1sH9uwwFJ1cKaJAid6PKx0dw2M180pQ0y/view?usp=sharing), it's a brightfield z-stack from a Leica SCN400. Feel free to use it how you want. Thank you! Turns out that current tifffile correctly...
> Regarding hdf5 1.10 the issue is that we need libnetcdf 4.5.0 to use it The Windows binaries at https://pypi.python.org/pypi/netCDF4/ are using hdf5-1.10.1 and netcdf4-4.4.1.1
At least on Windows, this issue is fixed by https://github.com/Unidata/netcdf-c/pull/366 (for me)
The issue seems that the transposed array is F_CONTIGUOUS and bottleneck wrongly uses the first non-zero stride for iteration. This patch fixes this issue for me ~~but I have not...
Probably a duplicate of #381 and fixed by #382.
> are there any updates on this? Doesn't look like. Timings are basically the same, maybe slightly worse: ``` Python 3.9.10 (tags/v3.9.10:f2f3f53, Jan 17 2022, 15:14:21) [MSC v.1929 64 bit...
The file does not really conform to the Tiff standard: First,it contains only one, the first, IFD/page. Second, it is larger than 4 GB but not a BigTiff file (I...
See also https://github.com/imagej/imagej1/blob/master/ij/io/TiffEncoder.java#L146
> no current wheels include deflate, jbig, libjpeg12, lerc, zstd > cgohlke's wheels included more libtiff dependencies `libtiff` included in the Windows wheels was built with `libjpeg-turbo`, `libwebp`, `libdeflate`, `zstd`,...
Thank you. It's an indentation error in the tests. I did not notice probably because the temp file wasn't deleted fast enough before it was re-opened...