Chris Hammill
Chris Hammill
It seems like batchtools and packrat should be usable together for reproducible HPC. Packrat package environments help keep versions consistent within a project. Unfortunately batchtools doesn't work naturally with packrat....
Frequently I run into the situation that I run set of jobs in parallel with `batchMap` only to realize that I forgot to include an interesting case in the input...
Basically inconsequential suggestion, but I was curious how your package worked and I noticed the `capture.output(print(fun))` line in `read_docstring`, https://github.com/Dasonk/docstring/blob/master/R/read_docstring.R#L17 I had guessed prior that it would be an application...
I think having a more full featured find utility would be great. I figured I'd post a plan to get ideas before I start trying to write it. In my...
Presently funflow has support for transforming workflows into graphs via `toDiagram` (although this isn't exported). It would be nice to be able to turn funflow graphs into DOT files. The...
I'm interested in running funflow pipelines shipping external jobs to a cluster scheduler e.g. torque/slurm. I was hoping to get some ideas on how to do this. I'm happy to...
The `proc` notation introduced by the `Arrows` language extension desugars in a very inefficient way, adding many irrelevant steps to the computation graph. A simple example, here a is the...
Hi all, I think it would be helpful if some documentation could be provided for how to monitor/diagnose/restart an ongoing pipeline, particularly in the Redis case. Currently I connect to...
Hi All, I'm interested in playing with blodwen. Anyone have any suggestions for what needs to be modified to get idris-mode compatible with idris2? Thanks! Chris
# Description I've added to the deid/data/deid.dicom protocol a large number of header removal and small number of blanks. These header removals/blanks were extracted from the 2022-03-08 version of the...