Chris Bielow
Chris Bielow
> @cbielow @timosachsenberg I was wondering if I should actually use the `MobilityPeak2D` instead of `MobilityPeak1D` and then appending to a `Mobilogram`. > > For more context, the main reason...
I cannot reproduce this on the current dev version (assuming the above input files are from the OpenMS repo) - neither with the default ini, nor when updating the ini...
I can reproduce within conda env: ``` Adding neutral: ---------- Adduct ----------------- Charge: 0 Amount: 1 MassSingle: 4.02511 Formula: (2)H4H-4 log P: -2.30259 MassExplainer table size: 38 FeatureDeconvolution.h:: could not...
just some links for future reference: OpenMS bioconda recipe: https://github.com/bioconda/bioconda-recipes/tree/master/recipes/openms-meta Clang compile flags: https://github.com/AnacondaRecipes/clang-compiler-activation-feedstock/blob/fbccd36831ae401e0561d74362b6ded4fb83a1db/recipe/build.sh G++ compile flags: https://github.com/conda-forge/ctng-compiler-activation-feedstock/blob/main/recipe/conda_build_config.yaml The bioconda-Decharger (and libOpenMS.so) seem to be compiled with ``` objdump -s...
I now switched to conda-forge's exact compiler `conda install -n gxx12 -c conda-forge cxx-compiler`, but still cannot reproduce. As a last effort i will compile all of our contrib using...
I used both the conda coinor with a default contrib, as well as a fully recompiled contrib with the conda g++12 incl. the following hack to force all contrib libs...
note of interest: stack smashing is detected only when the function in which the smashed variable resides is exiting, which makes sense: ``` #include void myfunc(char *const src, int len)...
alternative solution: use glpk for conda...
I did only glance over the IM-clustering algorithm, but it look like there is still binned IM-data with multiple IM-values per m/z value in a single spectrum. Our FF's probably...
sure, please go ahead @ChandraDevs1