shorah
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Shorah: UnboundLocalError: local variable 'end' referenced before assignment
Hi, I am running shorah (installed with conda) and I am getting an error, my command line is:
shorah shotgun -b my_bam.bam -f CoV.fasta -a 0.1 -w 201 -x 100000 -c 10 -r CoV:1-29903
Error is:
Traceback (most recent call last):
File "/miniconda3/bin/shorah", line 14, in
any idea?