10971 Segmentation fault (core dumped)

[tamaraprieto]

Hi,

I ran SCIPhI for 200000 iterations and at the end, I got a segmentation fault. I am still running version 0.1.2. Do you think it could be a bug solved in 0.1.3 and I should upgrade or do you suspect of any other reason?

... iterations: 190000 score: 0 bestScore: 0 num trees: 1 num Samples: 30 total # mut: 0 currently used: 0 normal - freq: 0.294349812831224 tmp: 0.290966440888769 SD: 0.0141906754859326 count: 568 trails: 568 normal - overDis: 549.01817943582 tmp: 535.818107369113 SD: 7.09533774296629 count: 493 trails: 493 normla - alpha: 161.603398357873 beta: 387.414781077947 mutation - overDis: 15.2505254570906 tmp: 15.180311698458 SD: 0.141906754859326 count: 649 trails: 649 mutation - alpha: 4.63260318596367 beta: 12.1142520424177 drop: 0.633748158249681 SD: 0.0141906754859326 count: 556 trails: 556 lambda: 0.533507173081417 SD: 0.0141906754859326 count: 502 trails: 502 iterations: 0 score: 0 bestScore: 0 num trees: 1 /var/log/slurm/spool_slurmd/job2059288/slurm_script: line 58: 10971 Segmentation fault (core dumped) sciphi -i ${RESDIR}/${REF}.fa --in ${WORKDIR}/SciphiSamples.${PATIENT}.txt -o Sciphi -r 2 -l 100000 --lz 1 --ls 100000 --pr 0.0001 --seed ${oddnumber} ${WORKDIR}/Sciphi.${PATIENT}.mpileup

Thanks in advance,

Tamara