carsen-stringer
carsen-stringer
I had trouble getting that angle info out of pyqtgraph. very happy to accept a pull request on this though if someone wants to dig into the code, but do...
no sorry, happy to accept a pull request for this though!
we're hoping to add native support this soon, but in the meantime many users run all of their data at the same time through suite2p (add all the folders across...
are you using the latest version with the torch dependency for the FFT? I switched to torch thinking it would handle the multithreading better
thanks, let us know what you find, I'm not sure if there is a fast way to do FFTs on an AMD CPU with python, you could try timing scipy's...
we will add to the documentation that we recommend intel processors
thank you @nicholasmalaya ! on suite2p's side, I am happy to have an alternate fft import for AMD users, particularly if it is easy to install with conda or pip...
hey @RisaIguchi it's stat['ypix'] and stat['xpix'], see the code here: https://suite2p.readthedocs.io/en/latest/outputs.html#stat-npy-fields note that you need to use this allow_pickle=True flag in the loading: "stat = np.load('stat.npy', allow_pickle=True)", we need to...
happy to take a pull request that implements this!
thanks for pointing that out, we need to fix that bug with `[1:nmax]`, it's from when we converted the code from matlab :) . right now it breaks our regression...