carrie1s

Error! The number of reads in the fastqs is not the same as the number of reads reported in the stats (0)

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Hello, I'm trying to run the Juicer pipeline following the CPU example and run sucessfully, however I got the below error message of data downloaded from GEO database. ************************************************************************ ***!...

An error with MOSEK call in AmpliconArchitect.py

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version: ampliconsuite 1.3.2 mosek 10.1.31 command: AmpliconSuite-pipeline.py -s XXX -t 12 --bam ../bam/XX.bam --run_AA --run_AC --ref hg38 Report error when running the step: AmpliconArchitect.py --ref GRCh38 --downsample 10 --bed XX_AA_CNV_SEEDS.bed...