Carles Hernandez-Ferrer

strelka-2 is frozen in CallGenome+callGenomeSegment

1

I run strelka-2 in a germline analysis and worked fine but when running a somatic analysis it gets frozen in `CallGenome+callGenomeSegment` step. Configuration: ``` /media/NFS/Carles/SV/strelka-2.9.5.centos6_x86_64/bin/configureStrelkaSomaticWorkflow.py \ --normalBam /media/NFS/Mclean_iPSC_WGS/Fibroblast/Fibroblast_bwa_b38_recal_leftalignindels.hasLB.bam \ --tumorBam...

Changing configuration location

1

Dear all, I am willing to change the configuration location for `bioservices` but I do not see how to do it since the class `BioServicesConfig` allows to change the default...

Problem displaying 2x2 matrix

1

Dear author, When using a small matrix (2x2) the package displays the vertex but not the node.  Also, using a big matrix...

Missing CSRF in session when authentication agains Keycloack

4

**Bug description** There is no CSRF set on session, then the `_process_callback` is failing when checking: ```python if csrf_token != session_csrf_token: logger.debug("CSRF token mismatch") return True, self._oidc_error() ``` **To Reproduce**...