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                                            Rich Edwards

Aligning contigs from deNovo Assembly with ngm-lr

Hi, This is also something that I would like to do with NGMLR and have the same issue. Would it be possible to make the max matrix size a settable...

nhmmer failed to run - Error: Invalid alphabet type in target for nhmmer. Expect DNA or RNA

I got this issue for a genome that started with a telomere repeat and did not have all four bases in the first few hundred characters. I got around it...