John Ladasky

DNN.evaluate(x,y) → "ValueError: Cannot use the given session to evaluate tensor"

5

Hello again! While I'm waiting to hear back from folks regarding the compatibility of TFLearn with scikit-learn's cross validation tools [(Issue #965)](https://github.com/tflearn/tflearn/issues/965), I've decided to try building a cross-validation system...

Dialects and floating-point precision

1

Thanks for this useful project! I am working with GCode files which specify measurements in inches to 6 decimal places (and yes, this level of precision can matter on professional...

Added a hash representation of GCode subclasses, so that they can be used as items in sets and dictionary keys. My use case: I wanted to enumerate all the mode...

OpenOPC.client() fails with "OPCError: Dispatch: Invalid class string"

3

Please correct my misunderstanding if I am wrong. The README.TXT leads me to believe that this version of OpenOPC is an updated version of the package that was originally described...

Hi there, I've been reading OPC documentation for a few days. I hope that I'm familiar enough with OPC to ask the right questions. I have a Python application to...

Minimum system specifications for standalone operation?

4

I've got two thirds of the workflow described in the [RFDiffusion paper from David Baker's lab](https://www.biorxiv.org/content/10.1101/2022.12.09.519842v2) up and running on my home PC. I've deployed RFDiffusion itself, and ProteinMPNN. I...

This message is a near-duplicate of an issue I opened on the ProteinMPNN discussion forum (https://github.com/dauparas/ProteinMPNN/issues/61). Since the issue involves using RFDiffusion output in ProteinMPNN and I have yet to...

Single-residue structure: angles have zero effect?

7

Hello, I think that I understand that the psi_im1 angle will have no effect on the positions of the (non-hydrogen) atoms in residue 1. I believe that's why the angle...