Benjamin Skubi

Results 5 comments of Benjamin Skubi

I was having a similar issue: > higlass-manage view demo.contact_matrix.cool > Pulling latest image... > done > Data directory: /home/benjamin/hg-data > Temp directory: () > Starting... default 8989 > Docker...

I ran into this as well while validating a pipeline with some test data. It seems to occur when the `.pairs` files input to the `merge` command have been merged...

Same issue on Windows. The problem generating this specific error is that one of higlass-manage's dependencies, pybbi, relies on the os.uname method which is only available on certain flavors of...

@jouvrard05 I didn't, unfortunately. I can use HiGlass on my linux desktop and static images can be created using the cooltools library so that's what I'm resorting to for now.

@jouvrard05 I tried a few things (dockerizing higlass-manage, using WSL) but the only thing that worked was straight-up dual booting linux (Ubuntu) and running higlass-manage that way. Fortunately it works...