bryan brancotte

Any link to example files ?

From JOBIM, GFF v2 GFF v3 seems importante

Is there a missing import in [MAF2SAM](https://github.com/biokit/bioconvert/blob/master/bioconvert/maf2sam.py#L46) ? I did not find `bioconvert.utils` in the sources.

Note that I run it from source

Hi, Once a EDAM.json is released in https://github.com/edamontology/edamontology/tree/master/releases I will change the https://github.com/IFB-ElixirFr/edam-browser to point to it and then always have the latest released version in https://ifb-elixirfr.github.io/edam-browser/.

Hi For the Edam Browser, if https://github.com/edamontology/edam2json/pull/9 is accepted I would just need the following somewhere: ``` edam2json EDAM.owl biotools --extended --minified > edam_extended.biotools.min.json ```

Hi @hmenager @matuskalas Reviving this old issue How can we/I add the edam2json extended export into the release process ? Also could we add in the 1.25 release the json...

Hi @matuskalas If the json-ld is ready to be automatically released then yes, let's do it ! We will have to change the browser so it reads the json-ld, but...

It is used with the command line tool scannew.pl. Note that in our settings secure_tmp_dir is on a shared file system and a basic `ls -la` takes 196seconds...

Yes, it is because of the jobs running on the cluster