brvpuyve

File exceeds memory mapped reader max buffer size.

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Hi, I am trying to process large .mgf files (approximately 10Gb), but unfortunately SearhGUI crashes. The memory assigned to Java was already increased to 250 Gb, but no luck. Any...

LFQBenchmark experiment - multiple organisms

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Hi everyone, I generated an updated LFQbenchmark dataset, similar to the one from Navarro et al. (https://pubmed.ncbi.nlm.nih.gov/27701404/). I was wondering how I could best annotate the mixtures (as pooled samples)?...

Dear pDeep Team, I have two questions concerning pDeep2: A) How can we add other modifications (like e.g. Propionyl)? B) Is there a possibility to directly compare/calculate the Pearson Correlation...