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                                            bressin

Get LFQ Values for fractionated data at protein level

Here are my settings: PsmIdentificationPath = "msms.psmtsv" SpectraFileRepository = "./spectrum_dir" Silent = false OutputPath = "out" Normalize = true PpmTolerance = 10.0 IsotopePpmTolerance = 5.0 Integrate = false NumIsotopesRequired =...

Get LFQ Values for fractionated data at protein level

FileName Condition Biorep Fraction Techrep Day5-F-G_SCX_X Day5 3 4 1 Day5-F-G_SCX_5 Day5 3 3 1 Day5-F-G_SCX_4 Day5 3 2 1 Day5-F-G_SCX_3 Day5 3 1 1 Day5-F-G_1D Day5 3 5 1...

Get LFQ Values for fractionated data at protein level

If the intensities are already weighted I don't need the coefficients, but I think it would be still nice to report them somewhere. However, sometimes the summed LFQ values don't...