DHSP for duplications?

[natalia-linhares]

Hi, DHSP (count of discordant reads that support the event) is very useful when we are evaluating a deletion. Why we do not have DHSP for duplications also? Could you implement it? Thanks for you time developing this tool.

[brentp]

DHSP was supposed to be a little more refined than what the caller (like lumpy) or the genotyper (like svtyper) would report. but it still has problems for deletions. I don't intend to implement for duplications, but you can look at the numbers from the caller or genotyper.