cyvcf2 icon indicating copy to clipboard operation
cyvcf2 copied to clipboard

libhts image not found

Open chadapohn opened this issue 4 years ago • 1 comments

Hi. I'm having this error on python 3.7 in osx el capitan

Traceback (most recent call last): File "/Volumes/Data1/pycli/pycli/vcf/test_cyvcf.py", line 1, in <module> from cyvcf2 import VCF File "/Users/proton/anaconda3/envs/pgx/lib/python3.7/site-packages/cyvcf2/__init__.py", line 1, in <module> from .cyvcf2 import (VCF, Variant, Writer, r_ as r_unphased, par_relatedness, ImportError: dlopen(/Users/proton/anaconda3/envs/pgx/lib/python3.7/site-packages/cyvcf2/cyvcf2.cpython-37m-darwin.so, 2): Library not loaded: @rpath/libdeflate.so Referenced from: /Users/proton/anaconda3/envs/pgx/lib/libhts.2.dylib Reason: image not found

Please suggest me how to solve this error.

chadapohn avatar Aug 15 '19 07:08 chadapohn

Can you give the output of inxi -F and explain how you installed cyvcf2?

CholoTook avatar Mar 09 '22 16:03 CholoTook