Brandon Invergo

Yes, it looks like your reading is correct to me. The doc strings in general look like they could be cleaned up and improved (i.e. `read()` doesn't say what it...

I have been experiencing this too. Upon debugging, I can confirm that the segmentation fault occurs due to an attempt to access unmapped memory in a call to `taxonomy::get_lvl_num()` in...

Putting the above checks in place allows `kmer2read_distr` to complete, however it then passes the problem on to `generate_kmer_distribution.py`. In particular, where the segfault would have happened (I think), the...

Sorry, my earlier supposition was wrong. The bug is probably here: ``` while (n1->get_lvl_num() > n2->get_lvl_num()) { if (n1->get_parent() == NULL){ cerr get_taxid() get_parent(); } ``` If `n1->get_parent() == NULL`,...

Sorry for having gone the route of "reporting on the fly". I have now to all appearances fixed this bug. I will try to put together a pull request later....