bounlu
bounlu
If there are many structural driver events identified by `Purple`, the `Orange` report might be very long and big in file size due to the `circos` plots displayed for each...
In the `targeted` mode, CHORD is disabled and [vCHORD](https://github.com/hartwigmedical/hmftools/tree/master/v-chord) is used instead for HRD detection for a panel of samples. However, it's not implemented in nf-core/oncoanalyser yet. It will be...
`Mutate-joins (dplyr)` documentation says: ``` relationship Handling of the expected relationship between the keys of x and y. If the expectations chosen from the list below are invalidated, an error...
The output display of `iostat -x 1` causes overflow by just 1 character. It would be great to squeeze the output to 196 characters (currently 197) so that it fits...
Whenever Firefox is updated, the URLs in the non-active tab groups which are pointing to the local files become non-functional to the addition of the below prefix `moz-extension://040e3b87-e9ac-43dc-9e7f-9f8f14464357/help/stg-unsupported-url.html#` This causes...
This script seems to be running very long, like 3 days per sample. Is this expected? ``` VIRT RES SHR S %CPU %MEM TIME+ COMMAND 71.9g 70.3g 1916 S 1.6...
### Checklist - [x] I added a descriptive title - [x] I searched open reports and couldn't find a duplicate ### What happened? I installed `miniconda3` and want to update...
### Description of the bug [This line](https://github.com/nf-core/methylseq/blob/4415e90a60faba40ccefd4c847666d28688a86ee/modules/nf-core/bismark/summary/main.nf#L36) seems to cause the issue. Because `bam` is specified as a `value` channel rather than `path`. ``` -[nf-core/methylseq] Pipeline completed with errors- ERROR...
### Description of feature For the targeted sequencing analysis, I have multiple target regions for different features and I want to check metrics for them separately. I want to provide...