Brian Osborne

Oscar, thank you for your reply. Does this search rely on Google? Is that why the search does not work when the Web server is running on my laptop?

Yes, have some entries, and the match works about 1 in 3 or 4 attempts. The requirement for having more than 2 words to get a match is odd, many...

Can you supply some example code to demonstrate this?

In order to remove the cycles the internal structure has to be refactored significantly. Given that this module is planned for deprecation I'm not sure we'll be able to find...

+1. This command is actually not doing Title Case, since any title can have punctuation. Please do not remove punctuation from my titles!

Marek, Please show us some code, then we can take a look. But I am noting that you said that when you use “asis:” your script works, presumably you are...

Marek, I don’t have your input file but I suspect that using a long string with returns in it is not working, as “-sequence". Try using Sequence objects, rather than...

Marek, OK, I see you tried using Sequence objects. How long are the sequences in “genome.fa”? Brian O. > On Feb 27, 2017, at 9:56 AM, piatekmj wrote: > >...

Marek, Excellent. Regarding plplot, are you sure that the executable is in your PATH? I think it’s called pltek. Brian O. > On Feb 27, 2017, at 12:05 PM, piatekmj...

Marek, I don’t know much about how plotting works in EMBOSS, but this seems to work for me: my %input = ( -sequence => $assembly{$frag}, -outfile => "${frag}.cpgplot", -window =>...