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                                            Boris Dimitrov

Fix inversed colour temperature.

I look forward to seeing this fix in the release. I have noticed the same problem.

Change shebang in run_midas.py

I believe the issue with python3 is that subprocess.check_output and similar operations now return array of bytes which is no longer directly useable as a text string -- you need...

Allow for own/other samtools/bowtie2 executables.

I had a similar problem on a brand new Ubuntu 18 AMI in AWS EC2 and worked around like so: ``` cd MIDAS/bin/Linux for f in *; do ln -sf...