blueskypie

controlling population stratification

1

Hi, Thank you for the paper and the step-by-step tutorial! Those are of great help! May I ask a question regarding your paper? It says that the following: > Individuals...

p-value threshold for HWE deviation

1

Your paper suggests the following: > For binary traits we suggest to exclude: HWE p value

Error: "are_factors(dataset) is not TRUE"

5

I got that error when apply nb on features of continuous variables. Does nb only work on discrete variables? Thanks!

In the following example, is the ` jitter = 0.2` for both width and height? if so, how to set them separately? `ggboxplot(..., add = "jitter", add.params = list(color =...

ways to improve IPO performance

5

Hi, I'm running IPO on 79 samples from an Dionex UltiMate 3000 UPLC with Thermo Scientific QExactive Orbitrap MS instrument. Here are my IPO parameter settings; unlisted parameters are same...