Blake Sweeney

Results 55 issues of Blake Sweeney

The use cases are old and out of date now. We can find newer examples of all sections. It would also be a good idea to see if there are...

The homepage is old and could use a refresh. A new design for it would be nice. We can use this a chance to add a small amount of the...

We should create some basic gene pages (Sequences in gene and browser only). We should use the igv.js browser for this as it seems to be much better than what...

The summary text can produce incorrect terms, eg https://rnacentral.org/rna/URS0001BF7BA4/9606, where it calls something 'sRNA'. sRNA isn't used any more and is an INSDC, not an SO term. We should use...

bug

UCSC has some very useful tracks for lncRNA, like various types of methylation. We should provide a link from RNAcentral to UCSC for the region in question, but with these...

- [ ] Fantom 5: Zenbu (https://fantom.gsc.riken.jp/zenbu/) - eg: https://fantom.gsc.riken.jp/zenbu/gLyphs/#config=338Jp369HlMrduGQJmN3-B;loc=hg38::chr10:102400829..102466332+ Might not be possible to link to fantom6 as it doesn't seem to update the url for each gene but...

Clean up tRNA diagrams for r2dt for tRNA models.

bug
qc