Bruce Martin
Bruce Martin
Hi @kislyuk - any update on thinking about solutions? I have multiple users who operate in the same account, and who all want to use aegea. The use case is...
Likely related: they are also not reporting unit test failures.
> @bkmartinjr am I roughly on target with the assessment here? If so, my question to @signechambers1 would be whether to invest in this for 1.0 or not. I don't...
Hi @brookmay - thank you for the bug report. I have a couple of questions to help diagnose next steps: 1. Can you provide a test case (ie, a publicly...
I have not been able to locally reproduce (tested this with a 3GB H5AD on S3, running cellxgene on my laptop). Will need a bit more info to help diagnose....
> Do you have any publicly readable s3 files that I can try out? I have temporarily put a very large (4.8GB, 1M+ cell) H5AD here: s3://czi.bruce-public/tmp/be48f323-749f-4ac4-b95e-51831778eca1.h5ad Please let me...
We are actively using the sparse tensor classes and would greatly appreciate the fix. Thanks!
@JulesGM - I am picking up this work as part of migrating SOMA loader support into an upstream package. If you are still interested in multi-GPU improvements, I would love...
@MaximilianLombardo - need to know which API was being used. In other words - fetching an H5AD, doing a slice from the SOMA objects, etc. Some of these are possible...
> ah ok - like specifically which function was being used Yes, or alternatively a description of the access path/workflow. Doesn't need to be super detailed, but there are different...