Wout Bittremieux
Wout Bittremieux
I don't think that that would be a very good change. Barely any people have heard of stone as measurement, and pound is also unfamiliar to the majority of people...
Indeed, using `?` is also mentioned in the "Key Points", but considering that no example or exercise uses it, I think this is a bit confusing. [Glob also supports other...
I've thought previously about trying to add such a peptide string with the fragments indicated, but it's not trivial with matplotlib. I'll have to see how hard it would be...
To be honest, I don't really have a good idea how to highlight the fragments in the peptide sequence using matplotlib. Suggestions on how to properly combine text with graphical...
Thanks for the tip. A matplotlib option would be preferable, but I don't know how to properly do it that way. If drawSvg works it could be worth looking into.
Thanks Joshua! This is a great start to the discussion. I'll be out of town until the end of the month, but if you're up for it, we should discuss...
Currently the NumPy include folder is also hard-coded to the Python 2.7 site-packages directory, which prevented me from installing FALCONN for Python 3 using pip. Other than that it seems...
@ilyaraz It were some conversion errors in the SWIG wrapper. See [this paste](http://pastebin.com/H47sFCKv) for the full output.
I'm trying to come up with something and would like to get your opinions. ![quickstart](https://github.com/bittremieux/spectrum_utils/assets/10773123/8ae34bf6-7a4d-4f1b-92e0-61ec7a8a1f09) I think this is more or less what was requested. (As a next step we...
Very relevant questions, and I haven't settled on an optimal implementation yet. Currently I provide additional parameters to the `plot` method to add the peptide sequence to an existing `Axes`/spectrum...