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High-performance tool for negation and uncertainty detection in radiology reports

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I'm having trouble running in google colab 1) !/content/negbio2/negbio/negbio_pipeline neg --output=/content/negbio2/ /content/negbio2/1.xml gives this error: /bin/bash: /content/negbio2/negbio/negbio_pipeline: No such file or directory 2) !python /content/negbio2/negbio/negbio_pipeline neg --output=/content/negbio2/ /content/negbio2/1.xml gives this...

Bumps [numpy](https://github.com/numpy/numpy) from 1.17.3 to 1.22.0. Release notes Sourced from numpy's releases. v1.22.0 NumPy 1.22.0 Release Notes NumPy 1.22.0 is a big release featuring the work of 153 contributors spread...

dependencies

Hi I want to add new patterns to neg_patterns2.yml, but I don't understand the format. Can you explain the format for writing new patterns. The pattern I want to add...

Bumps [tqdm](https://github.com/tqdm/tqdm) from 4.36.1 to 4.66.3. Release notes Sourced from tqdm's releases. tqdm v4.66.3 stable cli: eval safety (fixes CVE-2024-34062, GHSA-g7vv-2v7x-gj9p) tqdm v4.66.2 stable pandas: add DataFrame.progress_map (#1549) notebook: fix...

dependencies