biomedswe

Why does bwa-mem 2 return returncode = 0 even if an error occurs?

13

Hi! im using bwa-mem2 in python using subprocess.run ``` process = subprocess.run(cmd, shell=True) rc = process.returncode print("returncode:", rc) ``` e.g. if I deliberately rename the file to get the error:...

how to get rid of grey shadows when applying threshold

2

Hi! thanks for making this package! I have a quesiton though: Here I have made a circular plot  But I also want to add threshold lines:  But then...