ontobio
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python library for working with ontologies and ontology associations
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I am trying to run the Phenotype_Enrichment notebook. The AssociationSetFactory function enrichment_test is not returning anything. I have tried using different p-values as well as printing out messages from within...
Note: I did not update the header in the tests that specifically request GPAD 1.2. This PR should not be merged yet.
File "...\Anaconda3\envs\torch_nlp\lib\site-packages\diskcache\core.py", line 661, in _con settings = con.execute(select).fetchall() sqlite3.DatabaseError: file is not a database
https://scigraph-data.monarchinitiative.org/ is no longer returning results. There maybe other links that are also not working