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Matrix completion

Open mortonjt opened this issue 7 years ago • 0 comments

Need to pass in the SoftImpute module into Gneiss

We'll want

  • [ ] Cross validation with hyperparameter tuning on the minval
  • [ ] A really solid model statistic to optimize over (i.e. mse or loglikelihood).
  • [ ] A new OLS subclass that can perform the ilr-transform on the fly, so that we can actually fit pseudocounts from the matrix completion

mortonjt avatar Jul 26 '17 17:07 mortonjt