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Define SeqRepo interface

Open jsstevenson opened this issue 1 year ago • 1 comments

  • Create abstract SeqRepo class
  • Define sequence metadata data structure
    • JSON schema?
    • Dataclass/Namedtuple?
    • Pydantic?
      • Probably leaning in this direction
    • OpenAPI?
    • Considerations:
      • language neutrality?
      • dependency light?
      • minimal maintenance?
  • Separate out different implementations (+ separate dependency groups). IE a Redis submodule + dependency subgroup.

jsstevenson avatar Feb 10 '25 17:02 jsstevenson

get speed impact of Pydantic validation

jsstevenson avatar Feb 10 '25 17:02 jsstevenson

This issue is stale because it has been open 90 days with no activity. Remove stale label or comment or this will be closed in 30 days.

github-actions[bot] avatar Nov 10 '25 01:11 github-actions[bot]